Publications
(Publications sorted by publication date in descending order)
2026 (20 articles)
- (2026) Integrative genomics and zero-shot deep learning-based phenotyping reveal the genetic architecture of seed traits in mungbean (Vigna radiata L.). The Plant Genome, 19(3): e70294. doi:10.1002/tpg2.70294 (19 August 2026)
- (2026) Soybean variety development using aerial imagery and machine learning enabled phenomic-assisted selection. Crop Science, 66(4): e70341. doi:10.1002/csc2.70341 (10 August 2026)
- (2026) Phenological growth stages of Finger millet (Eleusine coracana (L.)) using 3-D phenotyping with relevance to breeding applications. Frontiers in Plant Science, 17: 1747707. doi:10.3389/fpls.2026.1747707 (27 July 2026)
- (2026) A sequence-based classifier distinguishes phenotype-associated genes from other gene models in plants. Genome Research, 36(9): 1863-1872. doi:10.1101/gr.281802.125 (14 July 2026)
- (2026) AI-integrated models for assessing agricultural resilience. arXiv, 2607.07759. doi:10.48550/arXiv.2607.07759 (8 July 2026)
- (2026) Procedural volumetric modeling of plant branching structures for finite element analysis. arXiv, 2607.05421. doi:10.48550/arXiv.2607.05421 (27 June 2026)
- (2026) UAV-derived canopy traits as heritable proxies for seedling vigor: genetic mapping and genomic prediction in mungbean (Vigna radiata L.). ESS Open Archive. doi:10.22541/essoar.15005308/v1 (26 June 2026)
- (2026) From simulation to discovery: AI enabled probabilistic emulation of mechanistic crop systems. arXiv, 2605.22848. doi:10.48550/arXiv.2605.22848 (15 May 2026)
- (2026) SAGE: Scalable agentic grounded evaluation for crop disease diagnosis. arXiv, 2605.09768. doi:10.48550/arXiv.2605.09768 (10 May 2026)
- (2026) Image-based high-throughput phenotyping enables genetic analyses of pod morphological traits in mungbean (Vigna radiata (L.) R. Wilczek). G3: Genes|Genomes|Genetics, 16(6): jkag106. doi:10.1093/g3journal/jkag106 (28 April 2026)
- (2026) Learning-based state and contact estimation for tendon-driven soft robot fingers using multimodal sensing. International Conference on Soft Robotics (RoboSoft), 2026: 446-453. doi:10.1109/RoboSoft67810.2026.11522885 (7 April 2026)
- (2026) A highly accurate, low-cost method for detecting and quantifying soybean leaf flipping phenotype during drought stress. The Plant Phenome Journal, 9(1): e70071. doi:10.1002/ppj2.70071 (3 April 2026)
- (2026) Neural 3D reconstruction and immersive VR visualization of row crops across phenological growth stages. Smart Agricultural Technology, 14: 102024. doi:10.1016/j.atech.2026.102024 (30 March 2026)
- (2026) AutoSiQ: A curated haploid Arabidopsis thaliana inflorescence dataset with a fine-grained silique ontology and a deep learning application for haploid fertility quantification. Frontiers in Plant Science, 17: 1767588. doi:10.3389/fpls.2026.1767588 (17 March 2026)
- (2026) AgGym: An agricultural biotic stress simulation environment for ultra-precision management planning. Computers and Electronics in Agriculture, 246: 111479. doi:10.1016/j.compag.2026.111479 (26 February 2026)
- (2026) Transformer model to determine spatio-temporal relationships of variables, and interpretability for soybean seed yield, oil, and protein prediction. Frontiers in Artificial Intelligence, 9: 1750108. doi:10.3389/frai.2026.1750108 (25 February 2026)
- (2026) HS-3D-NeRF: 3D surface and hyperspectral reconstruction from stationary hyperspectral images using multi-channel NeRFs. arXiv, 2602.16950. doi:10.48550/arXiv.2602.16950 (18 February 2026)
- (2026) MaizeField3D: A curated 3D point cloud and procedural model dataset of field-grown maize from a diversity panel. Plant Phenomics, 8(1): 100108. doi:10.1016/j.plaphe.2025.100108 (28 January 2026)
- (2026) A bi-stage data-driven process-based model for sorghum breeding and yield prediction: Coupling explainable artificial intelligence and crop modeling. Frontiers in Plant Science, 16: 1617753. doi:10.3389/fpls.2025.1617753 (7 January 2026)
- (2026) Conversational AI agents in education: An umbrella review of current utilization, challenges, and future directions for ethical and responsible use. AI and Ethics, 6: 72. doi:10.1007/s43681-025-00916-0 (19 December 2025)
2025 (50 articles)
- (2025) FloraForge: LLM-assisted procedural generation of editable and analysis-ready 3D plant geometric models or agricultural applications. arXiv, 2512.11925. doi:10.48550/arXiv.2512.11925 (11 December 2025)
- (2025) Towards smart canopies: Algorithmic design of maize canopy architectures that maximize light use efficiency. arXiv, 2512.06064. doi:10.48550/arXiv.2512.06064 (5 December 2025)
- (2025) Optimizing navigation and chemical application in precision agriculture with deep reinforcement learning and conditional action tree. Smart Agricultural Technology, 12: 101194. doi:10.1016/j.atech.2025.101194 (1 December 2025)
- (2025) Soybean maturity prediction using two-dimensional contour plots from drone-based time series imagery. The Plant Phenome Journal, 8(1): e70036. doi:10.1002/ppj2.70036 (1 December 2025)
- (2025) Advancing AI in agriculture through large-scale collaborative research. Communications of the ACM, 68(12): 78-86. doi:10.1145/376043 (19 November 2025)
- (2025) A data-driven crop model for biomass sorghum growth process simulation. Frontiers in Plant Science, 16: 1617775. doi:10.3389/fpls.2025.1617775 (12 November 2025)
- (2025) Genetic dissection of heat stress tolerance in soybean through genome-wide association studies and use of genomic prediction to enhance breeding applications. npj Science of Plants, 1: 9. doi:10.1038/s44383-025-00010-8 (3 November 2025)
- (2025) Direct flow simulations with implicit neural representation of complex geometry. Computer Methods in Applied Mechanics and Engineering, 446: 118248. doi:10.1016/j.cma.2025.118248 (1 November 2025)
- (2025) Accessing the effect of phyllotaxy and planting density on light interception in field-grown maize using 3D reconstructions. Smart Agricultural Technology, 12: 101566. doi:10.1016/j.atech.2025.101566 (31 October 2025)
- (2025) Benchmarking scientific machine-learning approaches for flow prediction around complex geometries. Communications Engineering, 4: 182. doi:10.1038/s44172-025-00513-3 (31 October 2025)
- (2025) Transformer-based spatio-temporal association of apple fruitlets. International Conference on Intelligent Robots and Systems (IROS), 2025: 3018-3025. doi:10.1109/IROS60139.2025.11247252 (19 October 2025)
- (2025) CaRT: Teaching LLM agents to know when they know enough. arXiv, 2510.08517. doi:10.48550/arXiv.2510.08517 (9 October 2025)
- (2025) Evolving stakeholder ties and co-creation in the agriculture sector: A psychological ownership perspective. Journal of Business & Industrial Marketing, 40(9): 1833-1844. doi:10.1108/JBIM-10-2024-0805 (9 October 2025)
- (2025) Enhancing yield prediction from plot-level satellite imagery through genotype and environment feature disentanglement. Frontiers in Plant Science, 16: 1617831. doi:10.3389/fpls.2025.1617831 (29 September 2025)
- (2025) Dual band thermal videography: Separating time-varying reflection and emission near ambient conditions. arXiv, 2509.11334. doi:10.48550/arXiv.2509.11334 (14 September 2025)
- (2025) VT-Intrinsic: Physics-based decomposition of reflectance and shading using a single visible-thermal image pair. arXiv, 2509.10388. doi:10.48550/arXiv.2509.10388 (12 September 2025)
- (2025) Finding sustainable, resilient, and scalable solutions for future indoor agriculture. npj Science of Plants, 1: 5. doi:10.1038/s44383-025-00006-4 (1 September 2025)
- (2025) Procedural generation of 3D maize plant architecture from LiDAR data. Computers and Electronics in Agriculture, 236: 110382. doi:10.1016/j.compag.2025.110382 (1 September 2025)
- (2025) Aligning LLM+PDDL symbolic plans with human objective specifications through evolutionary algorithm guidance. International Conference on Automation Science and Engineering (CASE), 2025: 1584-1590. doi:10.1109/CASE58245.2025.11163939 (17 August 2025)
- (2025) Geodesic tracing-based kinematic integration of rolling and sliding contact on manifold meshes for dexterous in-hand manipulation. arXiv, 2508.12439. doi:10.48550/arXiv.2508.12439 (17 August 2025)
- (2025) Soybean maturity prediction using two-dimensional contour plots from drone-based time series imagery. The Plant Phenome Journal, 8(1): e70036. doi:10.1002/ppj2.70036 (10 August 2025)
- (2025) Conversational LLM-Based Decision Support for Defect Classification in AFM Images. IEEE Open Journal of Instrumentation and Measurement, 4: 2500412. doi:10.1109/OJIM.2025.3592284 (24 July 2025)
- (2025) Optimizing navigation and chemical application in precision agriculture with deep reinforcement learning and conditional action tree. Smart Agricultural Technology, 12: 101194. doi:10.1016/j.atech.2025.101194 (17 July 2025)
- (2025) Toward a general framework for AI-enabled prediction in crop improvement. Theoretical and Applied Genetics, 138(7): 151. doi:10.1007/s00122-025-04928-6 (12 June 2025)
- (2025) SC-NeRF: NeRF-based point cloud reconstruction using a stationary camera for agricultural applications. Conference on Computer Vision and Pattern Recognition Workshops (CVPRW), 2025: 5472-5481. doi:10.1109/CVPRW67362.2025.00544 (11 June 2025)
- (2025) Fast estimation of globally optimal independent contact regions for robust grasping and manipulation. arXiv, 2506.08856. doi:10.48550/arXiv.2506.08856 (10 June 2025)
- (2025) Time series GWAS for iron deficiency chlorosis tolerance in soybean using aerial imagery. bioRχiv, 2025.05.30.657051. doi:10.1101/2025.05.30.657051 (2 June 2025)
- (2025) Genes and pathways determining flowering time variation in temperate-adapted sorghum. The Plant Journal, 122(5): e70250. doi:10.1111/tpj.70250 (1 June 2025)
- (2025) Octree-Based Shifted Boundary Method: Evaluating the impact of hanging-node removal on convergence and solver performance for linear PDEs. Advances in Computational Science and Engineering, 4: 119-141. doi:10.3934/acse.2025014 (1 June 2025)
- (2025) Octree-based adaptive mesh refinement and the shifted boundary method for efficient fluid dynamics simulations. Advances in Computational Science and Engineering, 4: 57-84. doi:10.3934/acse.2025012 (1 June 2025)
- (2025) TerraIncognita: A dynamic benchmark for species discovery using frontier models. arXiv, 2506.03182. doi:10.48550/arXiv.2506.03182 (29 May 2025)
- (2025) Towards large reasoning models for agriculture. arXiv, 2505.19259. doi:10.48550/arXiv.2505.19259 (25 May 2025)
- (2025) WeedNet: A foundation model-based global-to-local AI approach for real-time weed species identification and classification. arXiv, 2505.18930. doi:10.48550/arXiv.2505.18930 (25 May 2025)
- (2025) Audio-Visual Contact Classification for Tree Structures in Agricultures. arXiv, 2505.12665. doi:10.48550/arXiv.2505.12665 (19 May 2025)
- (2025) Dynamic multi-objective ergodic path planning using decomposition methods. International Conference on Robotics and Automation (ICRA), 2025: 13059-13066. doi:10.1109/ICRA55743.2025.11128676 (19 May 2025)
- (2025) Assessing phenotypic diversity and sensor-based metrics for drought response in soybean. Crop Science, 65(3): e70098. doi:10.1002/csc2.70098 (1 May 2025)
- (2025) Assessing the Impact of Yield Plasticity on Hybrid Performance in Maize. Physiologia Plantarum, 177(3): e70278. doi:10.1111/ppl.70278 (1 May 2025)
- (2025) Transcripts and genomic intervals associated with variation in metabolite abundance in maize leaves under field conditions. BMC Genomics, 26(1): 434. doi:10.1186/s12864-025-11580-3 (1 May 2025)
- (2025) Procedural generation of 3D maize plant architecture from LiDAR data. Computers and Electronics in Agriculture, 236: 110382. doi:10.1016/j.compag.2025.110382 (29 April 2025)
- (2025) Zero-shot sim-to-real transfer for reinforcement learning-based visual servoing of soft continuum arms. arXiv, 2504.16916. doi:10.48550/arXiv.2504.16916 (23 April 2025)
- (2025) Robust soybean seed yield estimation using high-throughput ground robot videos. Frontiers in Plant Science, 16: 1554193. doi:10.3389/fpls.2025.1554193 (30 March 2025)
- (2025) A Biohydrogel-Enabled Microneedle Sensor for In Situ Monitoring of Reactive Oxygen Species in Plants. ACS Sensors, 10(3): 1797-1810. doi:10.1021/acssensors.4c02645 (28 March 2025)
- (2025) Genomic and phenomic prediction for soybean seed yield, protein, and oil. The Plant Genome, 18(1): e70002. doi:10.1002/tpg2.70002 (1 March 2025)
- (2025) MaizeEar-SAM: Zero-shot maize ear phenotyping. arXiv, 2502.13399. doi:10.48550/arXiv.2502.13399 (19 February 2025)
- (2025) Evolving best practices for transcriptome-wide association studies accelerate discovery of gene-phenotype links. Current Opinion in Plant Biology, 83: 102670. doi:10.1016/j.pbi.2024.102670 (1 February 2025)
- (2025) Digital twins for the plant sciences. Trends in Plant Science, 30(5): 576-577. doi:10.1016/j.tplants.2024.12.013 (9 January 2025)
- (2025) Plot-level satellite imagery can substitute for UAVs in assessing maize phenotypes across multistate field trials. Plants People Planet, 7(4): 1011-1026. doi:10.1002/ppp3.10613 (7 January 2025)
- (2025) The impact of market orientation and brand storytelling on Shark Tank evaluations - A B2B and large language modeling perspective. Journal of Business & Industrial Marketing, 40(1): 265-280. doi:10.1108/JBIM-10-2024-0811 (2 January 2025)
- (2025) Use of artificial intelligence in soybean breeding and production. Advances in Agronomy, 190: 199-273. doi:10.1016/bs.agron.2024.11.003 (1 January 2025)
- (2025) InsectNet: Real-time identification of insects using an end-to-end machine learning pipeline. PNAS Nexus, 4(1): 575. doi:10.1093/pnasnexus/pgae575 (27 December 2024)
2024 (12 articles)
- (2024) Disentangling genotype and environment specific latent features for improved trait prediction using a compositional autoencoder. Frontiers in Plant Science, 15: 1476070. doi:10.3389/fpls.2024.1476070 (15 December 2024)
- (2024) Multi-sensor and multi-temporal high-throughput phenotyping for monitoring and early detection of water-limiting stress in soybean. The Plant Phenome Journal, 7(1): e70009. doi:10.1002/ppj2.70009 (30 November 2024)
- (2024) Persistent monitoring of insect-pests on sticky traps through hierarchical transfer learning and slicing-aided hyper inference. Frontiers in Plant Science, 15: 1484587. doi:10.3389/fpls.2024.1484587 (21 November 2024)
- (2024) Policy Brief 1: Intersection of indigenous data sovereignty and tribal agriculture data needs in the US. Collaboratory for Indigenous Data Governance. doi:10.6084/m9.figshare.26156170.v1 (14 October 2024)
- (2024) Sorghum segmentation and leaf counting using in silico trained deep neural model. The Plant Phenome Journal, 7(1): e70002. doi:10.1002/ppj2.70002 (13 October 2024)
- (2024) The foundational pose as a selection mechanism for the design of tool-wielding multi-finger robotic hands. arXiv, 2409.14158. doi:10.48550/arXiv.2409.14158 (21 September 2024)
- (2024) Evaluating Neural Radiance Fields for 3D Plant Geometry Reconstruction in Field Conditions. Plant Phenomics, 6: 0235. doi:10.34133/plantphenomics.0235 (9 September 2024)
- (2024) Beyond parameter count: Implicit bias in soft mixture of experts. arXiv, 2409.00879. doi:10.48550/arXiv.2409.00879 (2 September 2024)
- (2024) Smart connected farms and networked farmers to improve crop production, sustainability and profitability. Frontiers in Agronomy, 6 - 2024: 1410829. doi:10.3389/fagro.2024.1410829 (7 August 2024)
- (2024) Leveraging vision language models for specialized agricultural tasks. arXiv, 2407.19617. doi:10.48550/arXiv.2407.19617 (29 July 2024)
- (2024) Class-specific data augmentation for plant stress classification. The Plant Phenome Journal, 7(1): e20112. doi:10.1002/ppj2.20112 (12 July 2024)
- (2024) Zero-shot insect detection via weak language supervision. The Plant Phenome Journal, 7(1): e20107. doi:10.1002/ppj2.20107 (21 May 2024)